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Table 8 Selection of visualized ontologies

From: Why some tumours trigger neovascularisation and others don’t: the story thus far

Proteins equally expressed in angiogenic and non-angiogenic tumours

Proteins up-regulated in angiogenic tumours

Proteins up-regulated in non-angiogenic tumours

Ontology

GO-ontology database

Ontology

GO-ontology database

Ontology

GO-ontology database

Cell migration/sprouting angiogenesis

GO.0002042

Biological process

Immune response-activating signals

GO.0002757

Biological process

Regulation of synapses

GO.0051965

Biological process

Endothelial cell migration

GO.0043534

Biological process

Immune response-regulating cell signaling

GO.0002768

Biological process

Axon guidance and neuronal regulation

GO.0031290

GO.0007413

GO.0021952

GO.0021955

GO.0008038

Biological process

VEGF signaling pathways

GO.0038084

Biological process

Mesodermal cell differentiation

GO.0048333

Biological process

Activation of immune response

GO.0002253

Biological process

Positive regulation cell biogenesis

GO.0044089

Biological process

Basement membrane

GO.0005604

Cell component

Extracellular matrix part

GO.0044420

Cell component

Mitochondrial intermembrane space and matrix

GO.0005758

GO.0005759

Cell component

Complex involve in cell adhesion

GO.0098636

Cell component

PDGF receptor-binding

GO.0005161

Molecular function

Fibronectin- and extracellular matrix-binding

GO.0001968

GO.0050840

Molecular function

Ephrin receptor activity

GO.0005003

Molecular function

Extracellular matrix-binding

GO.0050840

Molecular function

Notch-binding

GO.0005112

Molecular function

Carbonate dehydratase activity

GO.0004089

Molecular function

Axon guidance

GO.0008046

Molecular function