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Table 1 Results of two-sample t tests comparing the total number of expressed genes for various sequencing depths

From: Effects of subsampling on characteristics of RNA-seq data from triple-negative breast cancer patients

Depth

P value, two-sided

P value, left-sided

P value, right-sided

0.1

0.096,85

0.048,45

0.951,57

0.2

0.125,02

0.062,51

0.937,49

0.3

0.124,18

0.062,10

0.937,91

0.4

0.123,61

0.061,81

0.938,19

0.5

0.118,90

0.059,45

0.940,55

0.6

0.128,56

0.064,28

0.935,72

0.7

0.145,83

0.072,92

0.927,08

0.8

0.161,76

0.080,88

0.919,12

0.9

0.155,24

0.077,62

0.922,38

  1. The total number of expressed genes for various sequencing depths is shown in Fig. 5.